Graph | Cluster | Transcripts | Mean logCPM | logFC M26/M2 | FDR M26/M2 | Classification | Human genes | C.elegans genes | Annotation |
---|---|---|---|---|---|---|---|---|---|
|
MligTC455_07586 | Mlig455_065216, Mlig455_059282 | 2.64 | 0.294 | 0.064 | CHRNA7 |
cholinergic receptor nicotinic alpha 7 subunit | acr-16 | Mlig455_065216 {REF} {Length: 2934} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=212.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=132.4]; Protein of unknown function (DUF812) [PF05667.13, score=21.2]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=283, Expect=9e-88]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=281, Expect=2e-87]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=278, Expect=7e-86]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=276, Expect=6e-86]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=271, Expect=7e-82]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=271, Expect=8e-84]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=269, Expect=2e-82]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=281, Expect=1e-87]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=276, Expect=8e-86]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=271, Expect=2e-84]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=270, Expect=4e-83]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=267, Expect=9e-81]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=295, Expect=4e-92]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=260, Expect=8e-80]} {Smed: dd_Smed_v6_6939_0_1, dd_Smed_v6_6939_0_1, [RH, Score=568, Expect=0.0]} {RNA1509_48605} {RNA1310_10796.1} {RNA815_3826.1} {SMEDTYPE: Parapharyngeal [dd_Smed_v6_6939_0_1, cholinergic receptor, nicotinic, alpha 3 (neuronal) (CHRNA3)]} {SMEDTYPE: repression [16]} Mlig455_059282 {REF} {Length: 3061} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=212.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=132.3]; Protein of unknown function (DUF812) [PF05667.13, score=20.1]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=281, Expect=5e-87]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=281, Expect=5e-87]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=277, Expect=1e-85]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=275, Expect=3e-85]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=271, Expect=9e-82]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=271, Expect=1e-83]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=268, Expect=3e-82]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=281, Expect=2e-87]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=276, Expect=1e-85]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=272, Expect=2e-84]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=268, Expect=2e-82]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=268, Expect=1e-80]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=294, Expect=1e-91]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=259, Expect=4e-79]} {Smed: dd_Smed_v6_6939_0_3, dd_Smed_v6_6939_0_3, [Score=564, Expect=0.0]} {RNA1509_48605} {RNA1310_10796.1} {RNA815_3826.1} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.317308.0]} {SMEDTYPE: repression [16]} |