Text search
Found 1 result for *Mlig455_031589*.
| Graph | Cluster | Transcripts | Mean logCPM | logFC M26/M2 | FDR M26/M2 | Classification | Human genes | C.elegans genes | Annotation |
|---|---|---|---|---|---|---|---|---|---|
|
|
MligTC455_24598 | Mlig455_065305, Mlig455_064305, Mlig455_061283, Mlig455_031589, Mlig455_064051, Mlig455_064050 | 3.95 | -0.001 | 0.973 | RTL1 |
retrotransposon Gag like 1 | Mlig455_065305 {REF} {Length: 633} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.9]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=144, Expect=5e-41]} {RNA1509_37808} {RNA1310_391} {RNA815_131.1} Mlig455_064305 {REF} {Length: 507} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=94.3]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=144, Expect=3e-40]} {RNA1509_37808} {RNA1310_227.1} {RNA815_131.1} {SMEDTYPE: X1 [raj_facs_types]} Mlig455_061283 {REF} {Length: 5420} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.7]; Aspartyl protease [PF09668.12, score=26.5]; Aspartyl protease [PF13650.8, score=26.3]; 'Cold-shock' DNA-binding domain [PF00313.24, score=22.7]; Zinc knuckle [PF00098.25, score=22.2]; Protein of unknown function (DUF1759) [PF03564.17, score=19.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.8, Expect=2e-20]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=296, Expect=8e-88]} {RNA1509_37808} {RNA1310_391} {RNA815_131.1} Mlig455_031589 {REF} {Length: 543} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.7]; Aspartyl protease [PF09668.12, score=26.5]; Aspartyl protease [PF13650.8, score=26.3]; 'Cold-shock' DNA-binding domain [PF00313.24, score=22.7]; Zinc knuckle [PF00098.25, score=22.2]; Protein of unknown function (DUF1759) [PF03564.17, score=19.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.8, Expect=2e-20]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=296, Expect=8e-88]} {RNA1509_37808} {RNA1310_227.1} {RNA815_131.1} Mlig455_064051 {REF} {Length: 397} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.4]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=113, Expect=3e-30]} {RNA1509_30677} {RNA1310_391} {RNA815_131.1} Mlig455_064050 {REF} {Length: 626} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=104.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.3]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=54.3, Expect=4e-08]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=53.9, Expect=3e-08]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=53.9, Expect=3e-08]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=126, Expect=4e-35]} {RNA1509_37808} {RNA1310_227.1} {RNA815_131.1} |