Graph | Cluster | Transcripts | Mean logCPM | logFC M26/M2 | FDR M26/M2 | Classification | Human genes | C.elegans genes | Annotation |
---|---|---|---|---|---|---|---|---|---|
|
MligTC455_20696 | Mlig455_021830, Mlig455_021753 | 6.8 | 0.039 | 0.750 | VPS4A |
vacuolar protein sorting 4 homolog A | vps-4 | Mlig455_021830 {REF} {Length: 2573} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=140.7]; Vps4 C terminal oligomerisation domain [PF09336.12, score=97.5]; MIT (microtubule interacting and transport) domain [PF04212.20, score=86.0]; AAA+ lid domain [PF17862.3, score=34.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=25.6]; AAA domain [PF13401.8, score=24.4]; AAA domain (Cdc48 subfamily) [PF07724.16, score=24.3]; AAA ATPase domain [PF13191.8, score=24.2]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=23.4]; AAA domain [PF13173.8, score=21.9]; TIP49 P-loop domain [PF06068.15, score=21.7]; Protein of unknown function (DUF815) [PF05673.15, score=20.9]; AAA domain [PF13238.8, score=20.2]; IstB-like ATP binding protein [PF01695.19, score=19.8]} {Human: ENSG00000132612, VPS4A, vacuolar protein sorting 4 homolog A, [RH, Score=681, Expect=0.0]; ENSG00000119541, VPS4B, vacuolar protein sorting 4 homolog B, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000031913, Vps4a, vacuolar protein sorting 4A, [RH, Score=684, Expect=0.0]; ENSMUSG00000009907, Vps4b, vacuolar protein sorting 4B, [RH, Score=655, Expect=0.0]} {Dmel: FBgn0283469, Vps4, Vacuolar protein sorting 4, [RH, Score=627, Expect=0.0]} {Celegans: WBGene00021334, vps-4, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=589, Expect=0.0]} {Smed: dd_Smed_v6_1556_0_1, dd_Smed_v6_1556_0_1, [RH, Score=640, Expect=0.0]} {RNA1509_4973, RNA1509_5023} {RNA1310_8591, RNA1509_4973, RNA1509_5023} {RNA1509_4973, RNA1509_5023, RNA815_2816.1} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.54118.0]} Mlig455_021753 {REF} {Length: 2337} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=140.7]; Vps4 C terminal oligomerisation domain [PF09336.12, score=97.5]; MIT (microtubule interacting and transport) domain [PF04212.20, score=82.9]; AAA+ lid domain [PF17862.3, score=34.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=25.6]; AAA domain (Cdc48 subfamily) [PF07724.16, score=24.4]; AAA domain [PF13401.8, score=24.3]; AAA ATPase domain [PF13191.8, score=24.2]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=23.4]; AAA domain [PF13173.8, score=21.9]; TIP49 P-loop domain [PF06068.15, score=21.7]; Protein of unknown function (DUF815) [PF05673.15, score=21.0]; AAA domain [PF13238.8, score=20.2]; IstB-like ATP binding protein [PF01695.19, score=19.8]} {Human: ENSG00000132612, VPS4A, vacuolar protein sorting 4 homolog A, [RH, Score=675, Expect=0.0]; ENSG00000119541, VPS4B, vacuolar protein sorting 4 homolog B, [RH, Score=659, Expect=0.0]} {Mouse: ENSMUSG00000031913, Vps4a, vacuolar protein sorting 4A, [RH, Score=677, Expect=0.0]; ENSMUSG00000009907, Vps4b, vacuolar protein sorting 4B, [RH, Score=650, Expect=0.0]} {Dmel: FBgn0283469, Vps4, Vacuolar protein sorting 4, [RH, Score=621, Expect=0.0]} {Celegans: WBGene00021334, vps-4, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=585, Expect=0.0]} {Smed: dd_Smed_v6_1556_0_1, dd_Smed_v6_1556_0_1, [RH, Score=636, Expect=0.0]} {RNA1509_5023} {RNA1310_8591} {RNA815_2816.1} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.54118.0]} |