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Found 1 result for *Mlig455_013588*.
| Graph | Cluster | Transcripts | Mean logCPM | logFC M26/M2 | FDR M26/M2 | Classification | Human genes | C.elegans genes | Annotation |
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MligTC455_35930 | Mlig455_051237, Mlig455_052667, Mlig455_020427, Mlig455_020368, Mlig455_013588, Mlig455_035614, Mlig455_070378, Mlig455_032612, Mlig455_030258 | 3.13 | 0.290 | 0.195 | Up-Down-Up RTL1; NYNRIN |
retrotransposon Gag like 1; NYN domain and retroviral integrase containing | Mlig455_051237 {REF} {Length: 4995} {Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [Score=50.8, Expect=2e-06]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=103, Expect=2e-24]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_10231} Mlig455_052667 {REF} {Length: 5183} {Pfam: Retrotransposon gag protein [PF03732.19, score=30.6]; Zinc knuckle [PF00098.25, score=22.5]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_15136} Mlig455_020427 {REF} {Length: 5234} {Pfam: Retrotransposon gag protein [PF03732.19, score=30.7]; Zinc knuckle [PF00098.25, score=21.4]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_10231} Mlig455_020368 {REF} {Length: 5223} {Pfam: Zinc knuckle [PF00098.25, score=23.7]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_10231} Mlig455_013588 {REF} {Length: 1060} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.2]; Spumavirus aspartic protease (A9) [PF03539.16, score=21.2]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=181, Expect=2e-52]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_20962} Mlig455_035614 {REF} {Length: 5367} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=69.5]; Integrase zinc binding domain [PF17921.3, score=61.5]; Integrase core domain [PF00665.28, score=51.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=8e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=75.9, Expect=1e-13]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [RH, Score=219, Expect=2e-64]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_10231} Mlig455_070378 {REF} {Length: 5332} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=98.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=98.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=96.4]; Integrase zinc binding domain [PF17921.3, score=62.8]; Integrase core domain [PF00665.28, score=51.7]; Spumavirus aspartic protease (A9) [PF03539.16, score=19.2]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=113, Expect=1e-24]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=94.4, Expect=6e-19]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=94.4, Expect=6e-19]} {Dmel: FBgn0029807, CG3108, [Score=61.2, Expect=5e-09]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=443, Expect=5e-138]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_10231} {SMEDTYPE: X1 [raj_facs_types]} Mlig455_032612 {REF} {Length: 5598} {Pfam: Retrotransposon gag protein [PF03732.19, score=30.6]; Zinc knuckle [PF00098.25, score=22.5]} {RNA1509_10020} {RNA1310_1554.1, RNA1509_10020} {RNA1509_10020, RNA815_10231} Mlig455_030258 {REF} {Length: 3077} {Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [Score=51.6, Expect=1e-06]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=99.4, Expect=4e-23]} {RNA1509_10020} {RNA1310_1554.1} {RNA815_10231} |