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Found 3241 results for path Down-Up-Down. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM logFC M26/M2 FDR M26/M2 Classification Human genes C.elegans genes Annotation
1. MligTC455_32712 Mlig455_006504 11.73 0.055 0.732

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Germline

WBP2NL

WBP2 N-terminal like Mlig455_006504 {REF} {Length: 1205} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [RH, Score=54.7, Expect=3e-08]} {Mouse: ENSMUSG00000022455, Wbp2nl, WBP2 N-terminal like, [Score=59.3, Expect=1e-09]} {RNA1509_47} {RNA1310_34773.1} {RNA815_15363.2}
2. MligTC455_37174 Mlig455_038112 10.44 -0.330 0.086

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Irradiation

Mlig455_038112 {REF} {Length: 1549} {RNA1509_25356} {RNA1310_8331} {RNA815_3206.1}
3. MligTC455_31552 Mlig455_003092 10.11 0.285 0.052

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Mlig455_003092 {REF} {Length: 2610} {Pfam: 4'-phosphopantetheinyl transferase superfamily [PF01648.22, score=51.3]; Wolframin Sel1-like repeat [PF20023.1, score=42.9]; Crp-like helix-turn-helix domain [PF13545.8, score=42.7]; Ribosomal protein L10 [PF00466.22, score=39.8]; Family of unknown function (DUF6470) [PF20074.1, score=39.6]; MarR family [PF01047.24, score=38.0]; CUT domain [PF02376.17, score=36.3]; Family of unknown function (DUF6307) [PF19826.1, score=34.2]; PASTA domain [PF03793.21, score=28.6]; Effector Associated Constant Component 1 [PF19953.1, score=28.6]; winged helix-turn-helix [PF16221.7, score=27.0]; Skp1 family, tetramerisation domain [PF03931.17, score=26.8]; Pox virus E6 protein [PF04656.14, score=25.1]; D-lactate dehydrogenase, membrane binding [PF09330.13, score=25.0]; SprT-like family [PF10263.11, score=24.3]; con80 domain of Katanin [PF13925.8, score=22.5]; Helicase HerA, central domain [PF01935.19, score=22.4]; von Willebrand factor type A domain [PF13768.8, score=21.9]; Mobile element transfer protein [PF05122.15, score=21.8]; HMGL-like [PF00682.21, score=20.4]; BetR domain [PF08667.12, score=19.8]} {RNA1509_5885} {RNA1310_14862.1} {RNA815_10064}
4. MligTC455_28410 Mlig455_059490 9.75 -0.738 0.000

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WSCD2

WSC domain containing 2 Mlig455_059490 {REF} {Length: 885} {Pfam: WSC domain [PF01822.21, score=91.9]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=53.5, Expect=8e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=52.4, Expect=1e-07]} {Dmel: FBgn0046685, Wsck, [Score=47.8, Expect=3e-06]} {RNA1509_1090, RNA1509_34744, RNA1509_74} {RNA1310_36278, RNA1509_1090, RNA1509_34744} {RNA1509_1090, RNA1509_34744, RNA815_20163.1}
5. MligTC455_36381 Mlig455_059467 9.56 -1.055 0.000

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Mlig455_059467 {REF} {Length: 294} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1485, RNA1509_19629} {RNA1310_39342, RNA1509_19629} {RNA1509_19629, RNA815_4733.1}
6. MligTC455_30531 Mlig455_016601 9.54 -0.579 0.000

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DYNLL1

dynein light chain LC8-type 1 dlc-1 Mlig455_016601 {REF} {Length: 1238} {Pfam: Dynein light chain type 1 [PF01221.20, score=62.8]; EF-hand domain pair [PF13499.8, score=21.2]; EF hand [PF00036.34, score=19.7]; EF-hand domain [PF14658.8, score=19.7]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=48.9, Expect=1e-07]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=48.9, Expect=7e-08]} {Dmel: FBgn0011760, ctp, cut up, [Score=47.0, Expect=3e-07]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=45.1, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=118, Expect=4e-34]} {RNA1509_344, RNA1509_38667} {RNA1310_2699, RNA1509_38667} {RNA1509_38667, RNA815_17450}
7. MligTC455_43028 Mlig455_022107 9.08 -0.167 0.304

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REEP5

receptor accessory protein 5 yop-1 Mlig455_022107 {REF} {Length: 4235} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=95.0]} {Human: ENSG00000129625, REEP5, receptor accessory protein 5, [RH, Score=188, Expect=2e-60]; ENSG00000115255, REEP6, receptor accessory protein 6, [RH, Score=179, Expect=5e-57]} {Mouse: ENSMUSG00000005873, Reep5, receptor accessory protein 5, [RH, Score=189, Expect=5e-61]} {Dmel: FBgn0033906, CG8331, [RH, Score=147, Expect=6e-45]} {Celegans: WBGene00022127, yop-1, Receptor expression-enhancing protein, [RH, Score=153, Expect=5e-47]} {Smed: dd_Smed_v6_838_0_1, dd_Smed_v6_838_0_1, [RH, Score=219, Expect=3e-73]} {RNA1509_11401, RNA1509_2646, RNA1509_26900, RNA1509_31127, RNA1509_4196, RNA1509_45496, RNA1509_4578, RNA1509_60136, RNA1509_634, RNA1509_7918, RNA1509_9210} {RNA1310_1401, RNA1509_11401, RNA1509_2646, RNA1509_26900, RNA1509_31127, RNA1509_4196, RNA1509_4578, RNA1509_60136, RNA1509_634, RNA1509_7918, RNA1509_9210} {RNA1509_11401, RNA1509_2646, RNA1509_26900, RNA1509_31127, RNA1509_4196, RNA1509_4578, RNA1509_60136, RNA1509_634, RNA1509_7918, RNA1509_9210, RNA815_252.1} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.265479.1]} {SMEDTYPE: repression [16]}
8. MligTC455_25007 Mlig455_018567 9.07 -0.257 0.024

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Mlig455_018567 {REF} {Length: 1245} {Pfam: Dynein light chain type 1 [PF01221.20, score=54.8]; EF-hand domain pair [PF13499.8, score=22.9]; EF hand [PF00036.34, score=20.9]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [Score=91.7, Expect=7e-24]} {RNA1509_1432, RNA1509_190, RNA1509_22166, RNA1509_27322, RNA1509_30457, RNA1509_30835, RNA1509_31756, RNA1509_34682, RNA1509_3720, RNA1509_7613} {RNA1310_38592, RNA1509_1432, RNA1509_190, RNA1509_22166, RNA1509_27322, RNA1509_30457, RNA1509_30835, RNA1509_31756, RNA1509_34682, RNA1509_3720, RNA1509_7613} {RNA1509_1432, RNA1509_190, RNA1509_22166, RNA1509_27322, RNA1509_30457, RNA1509_30835, RNA1509_31756, RNA1509_34682, RNA1509_3720, RNA1509_7613, RNA815_17745} {SMEDTYPE: Epidermal lineage (early + late + mature) [dd_Smed_v6_1881_0_1, NA]} {SMEDTYPE: X2 [raj_facs_types]}
9. MligTC455_39342 Mlig455_023423 8.97 -0.133 0.479

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Mlig455_023423 {REF} {Length: 983} {RNA1509_97} {RNA1310_57788.1, RNA1509_97} {RNA1509_97, RNA815_17220.2}
10. MligTC455_44273 Mlig455_031024, Mlig455_030693 8.87 0.177 0.274

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Irradiation

POLR2A

RNA polymerase II subunit A unc-89

Mlig455_031024 {REF} {Length: 1675} {RNA1509_4744} {RNA1310_59309.1} {RNA815_12566.4}

Mlig455_030693 {REF} {Length: 1801} {Human: ENSG00000284832, POLR2A, RNA polymerase II subunit A, [Score=61.6, Expect=2e-09]} {Mouse: ENSMUSG00000005198, Polr2a, polymerase (RNA) II (DNA directed) polypeptide A, [Score=61.2, Expect=1e-09]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=67.0, Expect=1e-11]} {Smed: dd_Smed_v6_1965_0_1, dd_Smed_v6_1965_0_1, [Score=66.6, Expect=1e-11]} {RNA1509_4744} {RNA1310_59309.1} {RNA815_12566.4}
11. MligTC455_23695 Mlig455_025308 8.82 -0.349 0.000

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GenAge

CFL1

cofilin 1 unc-60 Mlig455_025308 {REF} {Length: 1257} {TRANSSPLICED} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=92.0]} {Human: ENSG00000172757, CFL1, cofilin 1, [Score=69.7, Expect=3e-15]} {Mouse: ENSMUSG00000056201, Cfl1, cofilin 1, non-muscle, [Score=70.5, Expect=1e-15]} {Dmel: FBgn0011726, tsr, twinstar, [Score=80.1, Expect=1e-19]} {Celegans: WBGene00006794, unc-60, Actin-depolymerizing factor 2, isoform c, [Score=66.2, Expect=2e-14]} {Smed: dd_Smed_v6_260_0_1, dd_Smed_v6_260_0_1, [RH, Score=106, Expect=2e-30]} {RNA1509_1229, RNA1509_263, RNA1509_5166} {RNA1310_24120, RNA1509_1229, RNA1509_263, RNA1509_5166} {RNA1509_1229, RNA1509_263, RNA1509_5166, RNA815_11754.1} {SMEDTYPE: Xins [raj_facs_types]} {SMEDTYPE: Asexual_biased [CUFF.44656.0]}
12. MligTC455_26406 Mlig455_045949 8.72 -0.160 0.240

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Mlig455_045949 {REF} {Length: 2515} {RNA1509_289} {RNA1310_15978.1} {RNA815_2865.1}
13. MligTC455_44272 Mlig455_030617 8.72 0.338 0.059

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Irradiation

Mlig455_030617 {REF} {Length: 1626} {RNA1509_4744} {RNA1310_59309.1} {RNA815_12566.1}
14. MligTC455_33146 Mlig455_070708, Mlig455_021515, Mlig455_021253 8.66 0.194 0.250

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Irradiation

DNAJB8

DnaJ heat shock protein family (Hsp40) member B8 dnj-16

Mlig455_070708 {REF} {Length: 864}

Mlig455_021515 {REF} {Length: 1099} {Pfam: DnaJ domain [PF00226.33, score=80.6]} {Human: ENSG00000179407, DNAJB8, DnaJ heat shock protein family (Hsp40) member B8, [Score=83.2, Expect=1e-18]; ENSG00000105993, DNAJB6, DnaJ heat shock protein family (Hsp40) member B6, [Score=80.1, Expect=2e-17]} {Mouse: ENSMUSG00000048206, Dnajb8, DnaJ heat shock protein family (Hsp40) member B8, [Score=81.3, Expect=4e-18]; ENSMUSG00000029131, Dnajb6, DnaJ heat shock protein family (Hsp40) member B6, [Score=80.5, Expect=1e-17]} {Dmel: FBgn0034091, mrj, [Score=78.6, Expect=5e-17]} {Celegans: WBGene00001034, dnj-16, DNaJ domain (Prokaryotic heat shock protein), [Score=69.7, Expect=1e-13]} {Smed: dd_Smed_v6_2706_0_1, dd_Smed_v6_2706_0_1, [Score=73.9, Expect=1e-15]} {RNA1509_322} {RNA1310_15061} {RNA815_14904} {SMEDTYPE: X1 [raj_facs_types]}

Mlig455_021253 {REF} {Length: 1121} {Pfam: DnaJ domain [PF00226.33, score=77.2]} {Human: ENSG00000179407, DNAJB8, DnaJ heat shock protein family (Hsp40) member B8, [Score=83.6, Expect=1e-18]; ENSG00000105993, DNAJB6, DnaJ heat shock protein family (Hsp40) member B6, [Score=80.1, Expect=2e-17]} {Mouse: ENSMUSG00000048206, Dnajb8, DnaJ heat shock protein family (Hsp40) member B8, [Score=81.6, Expect=4e-18]; ENSMUSG00000029131, Dnajb6, DnaJ heat shock protein family (Hsp40) member B6, [Score=80.5, Expect=5e-17]} {Dmel: FBgn0034091, mrj, [Score=80.1, Expect=2e-17]} {Celegans: WBGene00001034, dnj-16, DNaJ domain (Prokaryotic heat shock protein), [Score=69.7, Expect=1e-13]} {Smed: dd_Smed_v6_2706_0_1, dd_Smed_v6_2706_0_1, [Score=73.9, Expect=9e-16]} {RNA1509_322, RNA1509_54837} {RNA1310_15061, RNA1509_322, RNA1509_54837} {RNA1509_322, RNA1509_54837, RNA815_14904} {SMEDTYPE: X1 [raj_facs_types]}
15. MligTC455_31554 Mlig455_003094 8.64 0.071 0.799

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Mlig455_003094 {REF} {Length: 2681} {Pfam: Wolframin Sel1-like repeat [PF20023.1, score=52.7]; Crp-like helix-turn-helix domain [PF13545.8, score=50.3]; 4'-phosphopantetheinyl transferase superfamily [PF01648.22, score=47.0]; Family of unknown function (DUF6307) [PF19826.1, score=42.0]; MarR family [PF01047.24, score=38.3]; Ribosomal protein L10 [PF00466.22, score=38.1]; Skp1 family, tetramerisation domain [PF03931.17, score=35.7]; PASTA domain [PF03793.21, score=32.0]; Family of unknown function (DUF6470) [PF20074.1, score=32.0]; D-lactate dehydrogenase, membrane binding [PF09330.13, score=30.1]; SprT-like family [PF10263.11, score=26.5]; winged helix-turn-helix [PF16221.7, score=26.3]; CUT domain [PF02376.17, score=24.1]; Helicase HerA, central domain [PF01935.19, score=22.5]; Bpu10I restriction endonuclease [PF09549.12, score=22.1]; von Willebrand factor type A domain [PF13768.8, score=21.6]; Protein of unknown function (DUF1340) [PF07067.13, score=21.0]; Mobile element transfer protein [PF05122.15, score=18.8]} {RNA1509_27680} {RNA1310_14862.1} {RNA815_5816}
16. MligTC455_29441 Mlig455_004773 8.58 -0.595 0.001

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Mlig455_004773 {REF} {Length: 2389} {RNA1509_13064, RNA1509_2408, RNA1509_28051, RNA1509_3258} {RNA1310_58249.1, RNA1509_13064, RNA1509_2408, RNA1509_28051, RNA1509_3258} {RNA1509_13064, RNA1509_2408, RNA1509_28051, RNA1509_3258, RNA815_25433}
17. MligTC455_30021 Mlig455_003977 8.58 -0.340 0.000

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GenAge

CAV1

caveolin 1 cav-1 Mlig455_003977 {REF} {Length: 996} {Pfam: Caveolin [PF01146.19, score=125.9]} {Human: ENSG00000105974, CAV1, caveolin 1, [Score=106, Expect=6e-30]} {Mouse: ENSMUSG00000007655, Cav1, caveolin 1, caveolae protein, [Score=104, Expect=3e-29]} {Celegans: WBGene00000301, cav-1, Caveolin-1, [RH, Score=84.3, Expect=7e-21]} {Smed: dd_Smed_v6_8555_0_1, dd_Smed_v6_8555_0_1, [RH, Score=150, Expect=6e-48]} {RNA1509_12190} {RNA1310_35724} {RNA815_6720.1} {SMEDTYPE: Neural (ciliated) [dd_Smed_v6_8555_0_1, cav-1 (cav-1)]} {SMEDTYPE: Xins [raj_facs_types]}
18. MligTC455_51703 Mlig455_062573 8.45 -0.254 0.011

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UBC

ubiquitin C ubq-1 Mlig455_062573 {REF} {Length: 3728} {Pfam: Ubiquitin family [PF00240.25, score=654.3]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=319.2]; Ubiquitin-like domain [PF14560.8, score=117.2]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=83.7]; Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=76.6]; Ubiquitin-like domain [PF18037.3, score=68.3]; DUF2407 ubiquitin-like domain [PF10302.11, score=62.3]; FlgD Ig-like domain [PF13860.8, score=38.9]; Toluene-4-monooxygenase system protein B (TmoB) [PF06234.14, score=38.7]; Cilia- and flagella-associated protein 298 [PF11069.10, score=34.5]; Staphylokinase/Streptokinase family [PF02821.18, score=32.8]; Crinkler effector protein N-terminal domain [PF20147.1, score=31.6]; UDP-glucose:Glycoprotein Glucosyltransferase [PF06427.13, score=28.0]; Ubiquitin-like domain [PF18036.3, score=27.6]; GDYXXLXY protein [PF14345.8, score=27.0]; Protein of unknown function (DUF969) [PF06149.14, score=26.1]; Bacterial Ig domain [PF17957.3, score=24.6]; Domain of Unknown Function with PDB structure (DUF3861) [PF12977.9, score=22.9]; ORF11CD3 domain [PF10549.11, score=22.5]; fungal STAND N-terminal Goodbye domain [PF17109.7, score=20.1]; Family of unknown function (DUF5450) [PF17529.4, score=19.2]} {Human: ENSG00000150991, UBC, ubiquitin C, [RH, Score=887, Expect=0.0]} {Mouse: ENSMUSG00000008348, Ubc, ubiquitin C, [RH, Score=890, Expect=0.0]} {Dmel: FBgn0086558, Ubi-p5E, Ubiquitin-5E, [RH, Score=889, Expect=0.0]} {Celegans: WBGene00006727, ubq-1, Polyubiquitin-A Ubiquitin Ubiquitin-related, [RH, Score=874, Expect=0.0]} {Smed: dd_Smed_v6_1697_0_2, dd_Smed_v6_1697_0_2, [RH, Score=164, Expect=8e-50]} {RNA1509_47440} {RNA1310_46150.1} {RNA815_15519.1}
19. MligTC455_25708 Mlig455_029969 8.35 0.316 0.042

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Irradiation

Mlig455_029969 {REF} {Length: 530} {TRANSSPLICED} {RNA1509_3406} {RNA1310_73924} {RNA815_39094}
20. MligTC455_51425 Mlig455_022033 8.27 -0.039 0.826

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CALM2

calmodulin 2 cmd-1 Mlig455_022033 {REF} {Length: 2160} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=141.5]; EF-hand domain pair [PF13499.8, score=125.9]; EF-hand domain pair [PF13833.8, score=108.2]; EF-hand domain [PF13405.8, score=98.7]; EF hand [PF13202.8, score=95.3]; EF-hand domain [PF14658.8, score=61.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=40.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.1]; EF-hand domain [PF08976.13, score=28.8]; Uncharacterised protein family (UPF0154) [PF03672.15, score=23.7]; Ca2+ insensitive EF hand [PF08726.12, score=21.4]; Dockerin type I domain [PF00404.20, score=21.1]; Caleosin related protein [PF05042.15, score=18.8]; Repeat of unknown function (DUF1103) [PF06513.13, score=18.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [RH, Score=295, Expect=2e-103]; ENSG00000198668, CALM1, calmodulin 1, [RH, Score=293, Expect=2e-103]; ENSG00000160014, CALM3, calmodulin 3, [RH, Score=291, Expect=2e-102]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [RH, Score=291, Expect=1e-102]; ENSMUSG00000036438, Calm2, calmodulin 2, [RH, Score=291, Expect=1e-102]; ENSMUSG00000001175, Calm1, calmodulin 1, [RH, Score=291, Expect=1e-102]} {Dmel: FBgn0000253, Cam, Calmodulin, [RH, Score=294, Expect=4e-104]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [RH, Score=295, Expect=1e-104]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [RH, Score=295, Expect=8e-105]} {RNA1509_10228, RNA1509_17166, RNA1509_22818, RNA1509_34197} {RNA1310_22130, RNA1509_17166, RNA1509_22818, RNA1509_34197} {RNA1509_17166, RNA1509_22818, RNA1509_34197, RNA815_4214.1} {SMEDTYPE: Asexual_biased [CUFF.56372.0]}
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